How to use Cytoscape for making interaction networks: 6 simple steps

<h1>Step 1- Make the files required to make the networks</h1> <p>Now, before using Cytoscape to replicate the network in figure 4A, we will need to have two types of files -</p> <h2>A matching file:</h2> <p>The matching file will contain all the mapping pairs that we want to show in the network, and essentially, every mapping in figure 4A is depicted by an arrow, and the two species marked by that arrow are put in this file.</p> <p>For example, the matching_file for figure 4A looks like this -</p> <p><a href="https://medium.com/@snippetsbio/how-to-use-cytoscape-for-making-interaction-networks-6-simple-steps-176a1e147020"><strong>Visit Now</strong></a></p>